Structure of molecule 65240

Molecule card · MolClass #65240

CD 09658

CD 09658: molecular structure, identifiers, source datasets and 12 saved model results in MolClass.

1 source records · 12 model builds with saved results

Explore classification models

Structure and identifiers

Imported compound names
CD 09658Yeast Bioactive Library Cross-Kingdom · compound_name
MolClass ID
65240
InChIKey
FZAXBDIMOOZDLW-UHFFFAOYSA-N
Canonical SMILES
Cn1ncc(c1(N))c2nc(cs2)c3ccc(cc3)Cl
Standard InChI
InChI=1S/C13H11ClN4S/c1-18-12(15)10(6-16-18)13-17-11(7-19-13)8-2-4-9(14)5-3-8/h2-7H,15H2,1H3
Stored Murcko scaffold
n1cc(c[nH]1)-c2nc(cs2)-c3ccccc3

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

No other molecules currently have this stored scaffold.

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors
3
CDK 2.12 · 2026-08-19
Hydrogen bond donors
1
CDK 2.12 · 2026-08-19
Rotatable bonds
2
CDK 2.12 · 2026-08-19
Topological polar surface area
84.97 Ų
CDK 2.12 · 2026-08-19
Molecular weight
290.773 g/mol
CDK 2.12 · 2026-08-19
XLogP
3.221
CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

Mitochondrial Fusion

Ensemble · model #19 · build #137

inactive

Model confidence
95.9%
Applicability domain
In domain
Scaffold similarity
61.1%

Recorded

Anti-fungal drug pump selectivity

Ensemble · model #18 · build #29

inactive

Model confidence
88.9%
Applicability domain
In domain
Scaffold similarity
63.4%

Recorded

Toxcicity

Ensemble · model #17 · build #28

toxicity reported

Model confidence
71.4%
Applicability domain
Outside domain
Scaffold similarity
28.2%

Recorded

Molecule Aggregation

Ensemble · model #16 · build #27

Aggregator

Model confidence
85.6%
Applicability domain
Outside domain
Scaffold similarity
49.4%

Recorded

Metabolite Likeness

Ensemble · model #15 · build #26

ZINC

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
45.1%

Recorded

Molecule Autofluorescence

LibSVM · model #13 · build #152

Autofluorescence

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
49.0%

Recorded

Blood Brain Barrier

RandomForest · model #7 · build #151

BBB+

Model confidence
84.0%
Applicability domain
Outside domain
Scaffold similarity
30.4%

Recorded

Derivation and validation of toxicophores for mutagenicity prediction

RandomForest · model #6 · build #15

nonmutagen

Model confidence
68.0%
Applicability domain
Outside domain
Scaffold similarity
33.4%

Recorded

Benchmark data set for in silico prediction of Ames mutagenicity

Ensemble2 · model #5 · build #134

Toxic

Model confidence
79.0%
Applicability domain
Outside domain
Scaffold similarity
40.9%

Recorded

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

NaiveBayes · model #4 · build #14

Accumulates

Model confidence
81.0%
Applicability domain
Outside domain
Scaffold similarity
36.4%

Recorded

ADME evaluation in drug discovery: Correlation of Caco-2 permeation with simple molecular properties

Ensemble · model #2 · build #244

app-

Model confidence
97.6%
Applicability domain
Outside domain
Scaffold similarity
18.7%

Recorded

Chemical genetics reveals a complex functional ground state of neural stem cells

Ensemble · model #1 · build #16

Mutual

Model confidence
87.3%
Applicability domain
Outside domain
Scaffold similarity
30.1%

Recorded

Source datasets

Dataset registrations and identifiers stored in MolClass.

  • Yeast Bioactive Library Cross-Kingdom

    Dataset #23 · CD 09658