Structure of molecule 54930

Molecule card · MolClass #54930

KM 05809

KM 05809: molecular structure, identifiers, source datasets and 12 saved model results in MolClass.

1 source records · 12 model builds with saved results

Explore classification models

Structure and identifiers

Imported compound names
KM 05809Yeast Bioactive Library Cross-Kingdom · compound_name
MolClass ID
54930
InChIKey
GOQKKFRTKKYMFP-UHFFFAOYSA-N
Canonical SMILES
CC1(C)(CC(=O)c2c(C1)c(Cl)sc2S(C)=NS(=O)(=O)c3ccc(cc3)Cl)
Standard InChI
InChI=1S/C17H17Cl2NO3S3/c1-17(2)8-12-14(13(21)9-17)16(24-15(12)19)25(3)20-26(22,23)11-6-4-10(18)5-7-11/h4-7H,8-9H2,1-3H3
Stored Murcko scaffold
N(Sc1ccccc1)=[S]c2scc3c2[CH]CCC3

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

No other molecules currently have this stored scaffold.

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors
4
CDK 2.12 · 2026-08-19
Hydrogen bond donors
0
CDK 2.12 · 2026-08-19
Rotatable bonds
3
CDK 2.12 · 2026-08-19
Topological polar surface area
119.4 Ų
CDK 2.12 · 2026-08-19
Molecular weight
450.427 g/mol
CDK 2.12 · 2026-08-19
XLogP
4.882
CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

Mitochondrial Fusion

Ensemble · model #19 · build #137

active

Model confidence
56.8%
Applicability domain
Outside domain
Scaffold similarity
34.7%

Recorded

Anti-fungal drug pump selectivity

Ensemble · model #18 · build #29

inactive

Model confidence
88.4%
Applicability domain
Outside domain
Scaffold similarity
41.4%

Recorded

Toxcicity

Ensemble · model #17 · build #28

toxicity reported

Model confidence
85.5%
Applicability domain
Outside domain
Scaffold similarity
19.9%

Recorded

Molecule Aggregation

Ensemble · model #16 · build #27

Aggregator

Model confidence
74.9%
Applicability domain
Outside domain
Scaffold similarity
24.4%

Recorded

Metabolite Likeness

Ensemble · model #15 · build #26

ZINC

Model confidence
98.6%
Applicability domain
Outside domain
Scaffold similarity
20.6%

Recorded

Molecule Autofluorescence

LibSVM · model #13 · build #152

Autofluorescence

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
31.0%

Recorded

Blood Brain Barrier

RandomForest · model #7 · build #151

BBB+

Model confidence
58.4%
Applicability domain
Outside domain
Scaffold similarity
20.0%

Recorded

Derivation and validation of toxicophores for mutagenicity prediction

RandomForest · model #6 · build #15

nonmutagen

Model confidence
65.0%
Applicability domain
Outside domain
Scaffold similarity
20.1%

Recorded

Benchmark data set for in silico prediction of Ames mutagenicity

Ensemble2 · model #5 · build #134

none

Model confidence
96.5%
Applicability domain
Outside domain
Scaffold similarity
22.3%

Recorded

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

NaiveBayes · model #4 · build #14

none

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
19.9%

Recorded

ADME evaluation in drug discovery: Correlation of Caco-2 permeation with simple molecular properties

Ensemble · model #2 · build #244

app+

Model confidence
63.5%
Applicability domain
Outside domain
Scaffold similarity
18.5%

Recorded

Chemical genetics reveals a complex functional ground state of neural stem cells

Ensemble · model #1 · build #16

Mutual

Model confidence
75.7%
Applicability domain
Outside domain
Scaffold similarity
22.0%

Recorded

Source datasets

Dataset registrations and identifiers stored in MolClass.

  • Yeast Bioactive Library Cross-Kingdom

    Dataset #23 · KM 05809