Structure of molecule 54335

Molecule card · MolClass #54335

RH 01805

RH 01805: molecular structure, identifiers, source datasets and 12 saved model results in MolClass.

1 source records · 12 model builds with saved results

Explore classification models

Structure and identifiers

Imported compound names
RH 01805Yeast Bioactive Library Cross-Kingdom · compound_name
MolClass ID
54335
InChIKey
ZNMOFDBPZNWCGV-UHFFFAOYSA-N
Canonical SMILES
OC(c1ccc(cc1)c2ccccc2)c3cc4cc(ccc4(o3))[N+](=O)[O-]
Standard InChI
InChI=1S/C21H15NO4/c23-21(16-8-6-15(7-9-16)14-4-2-1-3-5-14)20-13-17-12-18(22(24)25)10-11-19(17)26-20/h1-13,21,23H
Stored Murcko scaffold
o1c2ccccc2cc1Cc3ccc(cc3)-c4ccccc4

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

No other molecules currently have this stored scaffold.

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors
1
CDK 2.12 · 2026-08-19
Hydrogen bond donors
1
CDK 2.12 · 2026-08-19
Rotatable bonds
4
CDK 2.12 · 2026-08-19
Topological polar surface area
76.51 Ų
CDK 2.12 · 2026-08-19
Molecular weight
345.349 g/mol
CDK 2.12 · 2026-08-19
XLogP
4.671
CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

Mitochondrial Fusion

Ensemble · model #19 · build #137

active

Model confidence
78.7%
Applicability domain
Outside domain
Scaffold similarity
48.6%

Recorded

Anti-fungal drug pump selectivity

Ensemble · model #18 · build #29

inactive

Model confidence
91.7%
Applicability domain
In domain
Scaffold similarity
51.1%

Recorded

Toxcicity

Ensemble · model #17 · build #28

toxicity reported

Model confidence
79.6%
Applicability domain
Outside domain
Scaffold similarity
35.6%

Recorded

Molecule Aggregation

Ensemble · model #16 · build #27

Aggregator

Model confidence
88.0%
Applicability domain
Outside domain
Scaffold similarity
33.8%

Recorded

Metabolite Likeness

Ensemble · model #15 · build #26

HMDB

Model confidence
53.5%
Applicability domain
Outside domain
Scaffold similarity
35.5%

Recorded

Molecule Autofluorescence

LibSVM · model #13 · build #152

Autofluorescence

Model confidence
100.0%
Applicability domain
In domain
Scaffold similarity
51.1%

Recorded

Blood Brain Barrier

RandomForest · model #7 · build #151

BBB-

Model confidence
51.5%
Applicability domain
Outside domain
Scaffold similarity
27.3%

Recorded

Derivation and validation of toxicophores for mutagenicity prediction

RandomForest · model #6 · build #15

mutagen

Model confidence
92.0%
Applicability domain
Outside domain
Scaffold similarity
43.9%

Recorded

Benchmark data set for in silico prediction of Ames mutagenicity

Ensemble2 · model #5 · build #134

Toxic

Model confidence
73.7%
Applicability domain
Outside domain
Scaffold similarity
41.6%

Recorded

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

NaiveBayes · model #4 · build #14

none

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
35.4%

Recorded

ADME evaluation in drug discovery: Correlation of Caco-2 permeation with simple molecular properties

Ensemble · model #2 · build #244

app-

Model confidence
97.6%
Applicability domain
Outside domain
Scaffold similarity
22.1%

Recorded

Chemical genetics reveals a complex functional ground state of neural stem cells

Ensemble · model #1 · build #16

Mutual

Model confidence
92.9%
Applicability domain
Outside domain
Scaffold similarity
37.0%

Recorded

Source datasets

Dataset registrations and identifiers stored in MolClass.

  • Yeast Bioactive Library Cross-Kingdom

    Dataset #23 · RH 01805