Structure of molecule 52963

Molecule card · MolClass #52963

AW 00846

AW 00846: molecular structure, identifiers, source datasets and 12 saved model results in MolClass.

1 source records · 12 model builds with saved results

Explore classification models

Structure and identifiers

Imported compound names
AW 00846Yeast Bioactive Library Cross-Kingdom · compound_name
MolClass ID
52963
InChIKey
HXBMFTKKJWDZEN-UHFFFAOYSA-N
Canonical SMILES
O=C(c1ccc(o1)[N+](=O)[O-])N2CCCN(CC2)c3ccc(cc3[N+](=O)[O-])C(F)(F)F
Standard InChI
InChI=1S/C17H15F3N4O6/c18-17(19,20)11-2-3-12(13(10-11)23(26)27)21-6-1-7-22(9-8-21)16(25)14-4-5-15(30-14)24(28)29/h2-5,10H,1,6-9H2
Stored Murcko scaffold
o1cccc1[CH]N2CCN(c3ccccc3)CCC2

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

No other molecules currently have this stored scaffold.

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors
3
CDK 2.12 · 2026-08-19
Hydrogen bond donors
0
CDK 2.12 · 2026-08-19
Rotatable bonds
6
CDK 2.12 · 2026-08-19
Topological polar surface area
122.97 Ų
CDK 2.12 · 2026-08-19
Molecular weight
428.32 g/mol
CDK 2.12 · 2026-08-19
XLogP
3.439
CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

Mitochondrial Fusion

Ensemble · model #19 · build #137

inactive

Model confidence
79.6%
Applicability domain
In domain
Scaffold similarity
70.8%

Recorded

Anti-fungal drug pump selectivity

Ensemble · model #18 · build #29

inactive

Model confidence
79.8%
Applicability domain
In domain
Scaffold similarity
60.9%

Recorded

Toxcicity

Ensemble · model #17 · build #28

toxicity reported

Model confidence
80.4%
Applicability domain
Outside domain
Scaffold similarity
44.9%

Recorded

Molecule Aggregation

Ensemble · model #16 · build #27

Non-aggregator

Model confidence
60.4%
Applicability domain
In domain
Scaffold similarity
53.8%

Recorded

Metabolite Likeness

Ensemble · model #15 · build #26

ZINC

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
46.0%

Recorded

Molecule Autofluorescence

LibSVM · model #13 · build #152

Autofluorescence

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
44.7%

Recorded

Blood Brain Barrier

RandomForest · model #7 · build #151

BBB-

Model confidence
56.6%
Applicability domain
Outside domain
Scaffold similarity
39.7%

Recorded

Derivation and validation of toxicophores for mutagenicity prediction

RandomForest · model #6 · build #15

mutagen

Model confidence
68.0%
Applicability domain
Outside domain
Scaffold similarity
44.4%

Recorded

Benchmark data set for in silico prediction of Ames mutagenicity

Ensemble2 · model #5 · build #134

Toxic

Model confidence
53.8%
Applicability domain
Outside domain
Scaffold similarity
44.1%

Recorded

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

NaiveBayes · model #4 · build #14

none

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
48.4%

Recorded

ADME evaluation in drug discovery: Correlation of Caco-2 permeation with simple molecular properties

Ensemble · model #2 · build #244

app-

Model confidence
94.7%
Applicability domain
Outside domain
Scaffold similarity
35.6%

Recorded

Chemical genetics reveals a complex functional ground state of neural stem cells

Ensemble · model #1 · build #16

Mutual

Model confidence
92.6%
Applicability domain
Outside domain
Scaffold similarity
50.0%

Recorded

Source datasets

Dataset registrations and identifiers stored in MolClass.

  • Yeast Bioactive Library Cross-Kingdom

    Dataset #23 · AW 00846