Structure of molecule 52908

Molecule card · MolClass #52908

HTS 05759

HTS 05759: molecular structure, identifiers, source datasets and 12 saved model results in MolClass.

1 source records · 12 model builds with saved results

Explore classification models

Structure and identifiers

Imported compound names
HTS 05759Yeast Bioactive Library Cross-Kingdom · compound_name
MolClass ID
52908
InChIKey
FEYQMJIIBANQFH-UHFFFAOYSA-N
Canonical SMILES
Cc1c(cnn1c2ccc(F)cc2)C(=O)NCCNc3ccc(cc3[N+](=O)[O-])C(F)(F)F
Standard InChI
InChI=1S/C20H17F4N5O3/c1-12-16(11-27-28(12)15-5-3-14(21)4-6-15)19(30)26-9-8-25-17-7-2-13(20(22,23)24)10-18(17)29(31)32/h2-7,10-11,25H,8-9H2,1H3,(H,26,30)
Stored Murcko scaffold
n1cc([CH]NCCNc2ccccc2)cn1-c3ccccc3

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

No other molecules currently have this stored scaffold.

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors
4
CDK 2.12 · 2026-08-19
Hydrogen bond donors
2
CDK 2.12 · 2026-08-19
Rotatable bonds
9
CDK 2.12 · 2026-08-19
Topological polar surface area
102.09 Ų
CDK 2.12 · 2026-08-19
Molecular weight
451.375 g/mol
CDK 2.12 · 2026-08-19
XLogP
5.016
CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

Mitochondrial Fusion

Ensemble · model #19 · build #137

inactive

Model confidence
94.7%
Applicability domain
In domain
Scaffold similarity
75.6%

Recorded

Anti-fungal drug pump selectivity

Ensemble · model #18 · build #29

inactive

Model confidence
60.7%
Applicability domain
In domain
Scaffold similarity
62.6%

Recorded

Toxcicity

Ensemble · model #17 · build #28

toxicity reported

Model confidence
69.3%
Applicability domain
Outside domain
Scaffold similarity
35.0%

Recorded

Molecule Aggregation

Ensemble · model #16 · build #27

Aggregator

Model confidence
70.6%
Applicability domain
Outside domain
Scaffold similarity
38.0%

Recorded

Metabolite Likeness

Ensemble · model #15 · build #26

ZINC

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
40.9%

Recorded

Molecule Autofluorescence

LibSVM · model #13 · build #152

Autofluorescence

Model confidence
100.0%
Applicability domain
In domain
Scaffold similarity
53.4%

Recorded

Blood Brain Barrier

RandomForest · model #7 · build #151

BBB-

Model confidence
82.0%
Applicability domain
Outside domain
Scaffold similarity
30.1%

Recorded

Derivation and validation of toxicophores for mutagenicity prediction

RandomForest · model #6 · build #15

mutagen

Model confidence
74.0%
Applicability domain
Outside domain
Scaffold similarity
33.6%

Recorded

Benchmark data set for in silico prediction of Ames mutagenicity

Ensemble2 · model #5 · build #134

none

Model confidence
81.7%
Applicability domain
Outside domain
Scaffold similarity
34.5%

Recorded

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

NaiveBayes · model #4 · build #14

none

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
38.1%

Recorded

ADME evaluation in drug discovery: Correlation of Caco-2 permeation with simple molecular properties

Ensemble · model #2 · build #244

app-

Model confidence
97.4%
Applicability domain
Outside domain
Scaffold similarity
25.6%

Recorded

Chemical genetics reveals a complex functional ground state of neural stem cells

Ensemble · model #1 · build #16

Mutual

Model confidence
84.6%
Applicability domain
Outside domain
Scaffold similarity
39.1%

Recorded

Source datasets

Dataset registrations and identifiers stored in MolClass.

  • Yeast Bioactive Library Cross-Kingdom

    Dataset #23 · HTS 05759