Structure of molecule 4963

Molecule card · MolClass #4963

481-49-2

481-49-2: molecular structure, identifiers, source datasets and 13 saved model results in MolClass.

1 source records · 13 model builds with saved results

Explore classification models

Structure and identifiers

MolClass ID
4963
InChIKey
YVPXVXANRNDGTA-UHFFFAOYSA-N
Canonical SMILES
COc8ccc4cc8(Oc1ccc(cc1)CC2c7c(CCN2(C))cc3OCOc3c7(Oc6cc5c(CCN(C)C5(C4))cc6(OC)))
Standard InChI
InChI=1S/C37H38N2O6/c1-38-13-11-24-18-31(41-4)33-20-27(24)28(38)16-23-7-10-30(40-3)32(17-23)44-26-8-5-22(6-9-26)15-29-35-25(12-14-39(29)2)19-34-36(37(35)45-33)43-21-42-34/h5-10,17-20,28-29H,11-16,21H2,1-4H3
Stored Murcko scaffold
O1c2ccc(cc2)CC3NCCc4cc5OCOc5c(Oc6ccc7c(c6)C(NCC7)Cc8cccc1c8)c43

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors
2
CDK 2.12 · 2026-08-19
Hydrogen bond donors
0
CDK 2.12 · 2026-08-19
Rotatable bonds
2
CDK 2.12 · 2026-08-19
Topological polar surface area
61.86 Ų
CDK 2.12 · 2026-08-19
Molecular weight
606.709 g/mol
CDK 2.12 · 2026-08-19
XLogP
5.417
CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

Mitochondrial Fusion

Ensemble · model #19 · build #137

active

Model confidence
64.0%
Applicability domain
In domain
Scaffold similarity
65.7%

Recorded

Anti-fungal drug pump selectivity

Ensemble · model #18 · build #29

active

Model confidence
67.6%
Applicability domain
In domain
Scaffold similarity
67.4%

Recorded

Toxcicity

Ensemble · model #17 · build #28

toxicity reported

Model confidence
75.2%
Applicability domain
In domain
Scaffold similarity
50.8%

Recorded

Molecule Aggregation

Ensemble · model #16 · build #27

Aggregator

Model confidence
54.1%
Applicability domain
Outside domain
Scaffold similarity
33.3%

Recorded

Metabolite Likeness

Ensemble · model #15 · build #26

ZINC

Model confidence
62.1%
Applicability domain
Outside domain
Scaffold similarity
35.7%

Recorded

Molecule Autofluorescence

LibSVM · model #13 · build #152

Autofluorescence

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
43.9%

Recorded

Cell Cycle Activation/Inhibition

NaiveBayes · model #10 · build #21

cellcycle-

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
45.1%

Recorded

Blood Brain Barrier

RandomForest · model #7 · build #151

BBB+

Model confidence
58.5%
Applicability domain
Outside domain
Scaffold similarity
41.3%

Recorded

Derivation and validation of toxicophores for mutagenicity prediction

RandomForest · model #6 · build #15

nonmutagen

Model confidence
52.0%
Applicability domain
Outside domain
Scaffold similarity
41.6%

Recorded

Benchmark data set for in silico prediction of Ames mutagenicity

Ensemble2 · model #5 · build #134

Toxic

Model confidence
83.2%
Applicability domain
In domain
Scaffold similarity
61.5%

Recorded

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

NaiveBayes · model #4 · build #14

none

Model confidence
100.0%
Applicability domain
In domain
Scaffold similarity
50.3%

Recorded

ADME evaluation in drug discovery: Correlation of Caco-2 permeation with simple molecular properties

Ensemble · model #2 · build #244

app-

Model confidence
97.6%
Applicability domain
Outside domain
Scaffold similarity
25.2%

Recorded

Chemical genetics reveals a complex functional ground state of neural stem cells

Ensemble · model #1 · build #16

Proliferation

Model confidence
64.3%
Applicability domain
Outside domain
Scaffold similarity
47.8%

Recorded

Source datasets

Dataset registrations and identifiers stored in MolClass.

  • Toxicity Benchmark

    Dataset #5 · 481-49-2