Structure of molecule 456

Molecule card · MolClass #456

LOPAC 00930

LOPAC 00930: molecular structure, identifiers, source datasets and 13 saved model results in MolClass.

3 source records · 13 model builds with saved results

Explore classification models

Structure and identifiers

Imported compound names
GW2974Compound induced Neuronal Stem Cell Differentiation · compound_name
GW2974Compound accumulation in C. elegans · compound_name
6603857P.falciparum Sensitivity · compound_name
MolClass ID
456
InChIKey
DYYZXRCFCVDSKD-UHFFFAOYSA-N
Canonical SMILES
CN(C)c1cc5c(cn1)ncnc5(Nc4ccc3c(cnn3(Cc2ccccc2))c4)
Standard InChI
InChI=1S/C23H21N7/c1-29(2)22-11-19-20(13-24-22)25-15-26-23(19)28-18-8-9-21-17(10-18)12-27-30(21)14-16-6-4-3-5-7-16/h3-13,15H,14H2,1-2H3,(H,25,26,28)
Stored Murcko scaffold
n1ccc2c(ncnc2Nc3ccc4c(cnn4Cc5ccccc5)c3)c1

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

No other molecules currently have this stored scaffold.

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors
6
CDK 2.12 · 2026-08-19
Hydrogen bond donors
1
CDK 2.12 · 2026-08-19
Rotatable bonds
5
CDK 2.12 · 2026-08-19
Topological polar surface area
71.76 Ų
CDK 2.12 · 2026-08-19
Molecular weight
395.461 g/mol
CDK 2.12 · 2026-08-19
XLogP
4.35
CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

Mitochondrial Fusion

Ensemble · model #19 · build #137

active

Model confidence
54.3%
Applicability domain
Outside domain
Scaffold similarity
46.3%

Recorded

Anti-fungal drug pump selectivity

Ensemble · model #18 · build #29

inactive

Model confidence
98.5%
Applicability domain
Outside domain
Scaffold similarity
48.0%

Recorded

Toxcicity

Ensemble · model #17 · build #28

toxicity reported

Model confidence
80.1%
Applicability domain
Outside domain
Scaffold similarity
37.5%

Recorded

Molecule Aggregation

Ensemble · model #16 · build #27

Aggregator

Model confidence
66.9%
Applicability domain
Outside domain
Scaffold similarity
35.9%

Recorded

Metabolite Likeness

Ensemble · model #15 · build #26

ZINC

Model confidence
98.6%
Applicability domain
Outside domain
Scaffold similarity
37.9%

Recorded

Molecule Autofluorescence

LibSVM · model #13 · build #152

Autofluorescence

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
45.3%

Recorded

Cell Cycle Activation/Inhibition

NaiveBayes · model #10 · build #21

cellcycle-

Model confidence
96.2%
Applicability domain
Outside domain
Scaffold similarity
27.0%

Recorded

Blood Brain Barrier

RandomForest · model #7 · build #151

BBB+

Model confidence
66.3%
Applicability domain
Outside domain
Scaffold similarity
30.7%

Recorded

Derivation and validation of toxicophores for mutagenicity prediction

RandomForest · model #6 · build #15

mutagen

Model confidence
76.0%
Applicability domain
Outside domain
Scaffold similarity
36.7%

Recorded

Benchmark data set for in silico prediction of Ames mutagenicity

Ensemble2 · model #5 · build #134

none

Model confidence
62.5%
Applicability domain
Outside domain
Scaffold similarity
38.3%

Recorded

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

NaiveBayes · model #4 · build #14

none

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
46.2%

Recorded

ADME evaluation in drug discovery: Correlation of Caco-2 permeation with simple molecular properties

Ensemble · model #2 · build #244

app-

Model confidence
57.5%
Applicability domain
Outside domain
Scaffold similarity
29.2%

Recorded

Chemical genetics reveals a complex functional ground state of neural stem cells

Ensemble · model #1 · build #16

Mutual

Model confidence
61.0%
Applicability domain
In domain
Scaffold similarity
52.6%

Recorded

Source datasets

Dataset registrations and identifiers stored in MolClass.

  • Compound induced Neuronal Stem Cell Differentiation

    Dataset #1 · 471

  • Compound accumulation in C. elegans

    Dataset #4 · -0.967695383475473

  • P.falciparum Sensitivity

    Dataset #8 · 6603857