Molecule card · MolClass #23956
HMDB00725
HMDB00725: molecular structure, identifiers, source datasets and 0 saved model results in MolClass.
1 source records · 0 model builds with saved results
Explore classification modelsStructure and identifiers
- Imported compound names
- HMDB00725Metabolite Likeness · compound_name
- MolClass ID
- 23956
- InChIKey
- PMMYEEVYMWASQN-DMTCNVIQSA-N
- Canonical SMILES
- OC1CNC(C1)C(O)=O
- Standard InChI
- InChI=1S/C5H9NO3/c7-3-1-4(5(8)9)6-2-3/h3-4,6-7H,1-2H2,(H,8,9)/t3-,4+/m1/s1
- Stored Murcko scaffold
- N1CCCC1
Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.
Molecules with the same Murcko scaffold
Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.
- LOPAC 00823#320
- LOPAC 00365#328
- LOPAC 00371#594
- 4399-80-8#2979
- NOCAS_M153#3002
- 56222-35-6#3066
- 123-75-1#3133
- 173106-65-5#5352
- 2154-68-9#6632
- 930-55-2#8459
- 24867492#9375
- 11953777#9496
- 10255#9691
- HMDB02113#24040
- HMDB05764#24164
- 14719311#38180
- 24809030#39565
- 24806070#39653
- 7975283#40608
- 17505070#41527
Calculated molecular properties
Stored descriptor calculations, not measured experimental values.
- Hydrogen bond acceptors
- 4
- CDK 2.12 · 2026-08-19
- Hydrogen bond donors
- 3
- CDK 2.12 · 2026-08-19
- Rotatable bonds
- 1
- CDK 2.12 · 2026-08-19
- Topological polar surface area
- 69.56 Ų
- CDK 2.12 · 2026-08-19
- Molecular weight
- 131.13 g/mol
- CDK 2.12 · 2026-08-19
- XLogP
- -0.786
- CDK 2.12 · 2026-08-19
Saved model predictions
Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.
No saved predictions yet. Explore classification models to choose a prediction.
Source datasets
Dataset registrations and identifiers stored in MolClass.
Metabolite Likeness
Dataset #15 · HMDB00725