Structure of molecule 2390

Molecule card · MolClass #2390

ICHTHYNONE

ICHTHYNONE: molecular structure, identifiers, source datasets and 13 saved model results in MolClass.

1 source records · 13 model builds with saved results

Explore classification models

Structure and identifiers

Imported compound names
ICHTHYNONECompound accumulation in C. elegans · compound_name
MolClass ID
2390
InChIKey
NPYOKEDYJXYSTA-UHFFFAOYSA-N
Canonical SMILES
COc1cc5OCOc5(cc1C2=COc3c4C=CC(C)(C)Oc4(c(cc3(C2(=O)))OC))
Standard InChI
InChI=1S/C23H20O7/c1-23(2)6-5-12-21-14(8-19(26-4)22(12)30-23)20(24)15(10-27-21)13-7-17-18(29-11-28-17)9-16(13)25-3/h5-10H,11H2,1-4H3
Stored Murcko scaffold
O1C=C([CH]c2ccc3OCC=Cc3c12)c4ccc5OCOc5c4

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

No other molecules currently have this stored scaffold.

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors
1
CDK 2.12 · 2026-08-19
Hydrogen bond donors
0
CDK 2.12 · 2026-08-19
Rotatable bonds
3
CDK 2.12 · 2026-08-19
Topological polar surface area
72.45 Ų
CDK 2.12 · 2026-08-19
Molecular weight
408.402 g/mol
CDK 2.12 · 2026-08-19
XLogP
3.697
CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

Mitochondrial Fusion

Ensemble · model #19 · build #137

inactive

Model confidence
68.8%
Applicability domain
In domain
Scaffold similarity
56.4%

Recorded

Anti-fungal drug pump selectivity

Ensemble · model #18 · build #29

inactive

Model confidence
95.0%
Applicability domain
In domain
Scaffold similarity
53.4%

Recorded

Toxcicity

Ensemble · model #17 · build #28

toxicity reported

Model confidence
82.5%
Applicability domain
Outside domain
Scaffold similarity
41.5%

Recorded

Molecule Aggregation

Ensemble · model #16 · build #27

Aggregator

Model confidence
74.5%
Applicability domain
Outside domain
Scaffold similarity
38.9%

Recorded

Metabolite Likeness

Ensemble · model #15 · build #26

ZINC

Model confidence
68.9%
Applicability domain
Outside domain
Scaffold similarity
45.1%

Recorded

Molecule Autofluorescence

LibSVM · model #13 · build #152

mutual

Model confidence
100.0%
Applicability domain
In domain
Scaffold similarity
65.7%

Recorded

Cell Cycle Activation/Inhibition

NaiveBayes · model #10 · build #21

cellcycle-

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
37.4%

Recorded

Blood Brain Barrier

RandomForest · model #7 · build #151

BBB+

Model confidence
51.5%
Applicability domain
Outside domain
Scaffold similarity
31.6%

Recorded

Derivation and validation of toxicophores for mutagenicity prediction

RandomForest · model #6 · build #15

nonmutagen

Model confidence
54.0%
Applicability domain
In domain
Scaffold similarity
50.2%

Recorded

Benchmark data set for in silico prediction of Ames mutagenicity

Ensemble2 · model #5 · build #134

none

Model confidence
73.6%
Applicability domain
Outside domain
Scaffold similarity
49.3%

Recorded

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

NaiveBayes · model #4 · build #14

none

Model confidence
86.7%
Applicability domain
In domain
Scaffold similarity
69.3%

Recorded

ADME evaluation in drug discovery: Correlation of Caco-2 permeation with simple molecular properties

Ensemble · model #2 · build #244

app-

Model confidence
97.6%
Applicability domain
Outside domain
Scaffold similarity
25.3%

Recorded

Chemical genetics reveals a complex functional ground state of neural stem cells

Ensemble · model #1 · build #16

Proliferation

Model confidence
66.0%
Applicability domain
Outside domain
Scaffold similarity
37.0%

Recorded

Source datasets

Dataset registrations and identifiers stored in MolClass.

  • Compound accumulation in C. elegans

    Dataset #4 · 16.3119821019302