Molecule card · MolClass #22488

4130

4130: molecular structure, identifiers, source datasets and 0 saved model results in MolClass.

1 source records · 0 model builds with saved results

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Structure and identifiers

MolClass ID: 22488
InChIKey: ZQDGLGFKYPXUCU-UHFFFAOYSA-N
Canonical SMILES: COc4cccc(CNC(=O)C3CCCN3(C(=O)C(N)C(c1ccccc1)c2ccccc2))c4(OC)
Standard InChI: InChI=1S/C29H33N3O4/c1-35-24-17-9-15-22(27(24)36-2)19-31-28(33)23-16-10-18-32(23)29(34)26(30)25(20-11-5-3-6-12-20)21-13-7-4-8-14-21/h3-9,11-15,17,23,25-26H,10,16,18-19,30H2,1-2H3,(H,31,33)
Stored Murcko scaffold: c1ccc(cc1)CN[CH]C2N([CH]CC(c3ccccc3)c4ccccc4)CCC2

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

1#18559
5#18562
4#18564
2#18565
7#18566
23#18567
17#18573
3#18574
22#18577
12#18609
6#18622
33#18707
891#19392
956#19445
1081#19570
1118#19607
2050#20518
2064#20532
2073#20541
2077#20545

View all molecules with this scaffold →

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors: 5; CDK 2.12 · 2026-08-19
Hydrogen bond donors: 2; CDK 2.12 · 2026-08-19
Rotatable bonds: 11; CDK 2.12 · 2026-08-19
Topological polar surface area: 93.89 Å²; CDK 2.12 · 2026-08-19
Molecular weight: 487.591 g/mol; CDK 2.12 · 2026-08-19
XLogP: 3.262; CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

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Source datasets

Dataset registrations and identifiers stored in MolClass.

Thrombin Molecule Binding
Dataset #14 · 4130