Molecule card · MolClass #21639

3225

3225: molecular structure, identifiers, source datasets and 0 saved model results in MolClass.

1 source records · 0 model builds with saved results

Explore classification models

Structure and identifiers

MolClass ID: 21639
InChIKey: WJVLTXKAUHPMNM-UHFFFAOYSA-N
Canonical SMILES: NCc3ccc(cc3(CNC(=O)CN1C(=O)C(=NC=C1Cl)NCC(F)(F)c2cccc[n+]2([O-])))Cl
Standard InChI: InChI=1S/C21H20Cl2F2N6O3/c22-15-5-4-13(8-26)14(7-15)9-27-18(32)11-30-17(23)10-28-19(20(30)33)29-12-21(24,25)16-3-1-2-6-31(16)34/h1-7,10H,8-9,11-12,26H2,(H,27,32)(H,28,29)
Stored Murcko scaffold: N=1C=CN([CH]C1NCCc2cccc[nH+]2)C[CH]NCc3ccccc3

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

173#18689
187#18703
191#18709
198#18714
203#18719
204#18738
193#18743
194#18970
2164#20628
2180#20642
2192#20653
2196#20657
2197#20658
2200#20661
3185#21602
3198#21615
3807#22180
3808#22181
3960#22326
3963#22329

View all molecules with this scaffold →

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors: 7; CDK 2.12 · 2026-08-19
Hydrogen bond donors: 3; CDK 2.12 · 2026-08-19
Rotatable bonds: 10; CDK 2.12 · 2026-08-19
Topological polar surface area: 126.76 Å²; CDK 2.12 · 2026-08-19
Molecular weight: 513.325 g/mol; CDK 2.12 · 2026-08-19
XLogP: 2.425; CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

No saved predictions yet. Explore classification models to choose a prediction.

Source datasets

Dataset registrations and identifiers stored in MolClass.

Thrombin Molecule Binding
Dataset #14 · 3225