Molecule card · MolClass #21502

3084

3084: molecular structure, identifiers, source datasets and 0 saved model results in MolClass.

1 source records · 0 model builds with saved results

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Structure and identifiers

MolClass ID: 21502
InChIKey: ZHTYBHJRYWPRIG-HPKJDOSXSA-N
Canonical SMILES: CCC(C)C(NC(=O)C(O)Cc1ccccc1)C(=O)N3C4CCCCC4(CC3(C(=O)NCc2ccc(cc2)C(=N)N))
Standard InChI: InChI=1S/C32H43N5O4/c1-3-20(2)28(36-31(40)27(38)17-21-9-5-4-6-10-21)32(41)37-25-12-8-7-11-24(25)18-26(37)30(39)35-19-22-13-15-23(16-14-22)29(33)34/h4-6,9-10,13-16,20,24-28,38H,3,7-8,11-12,17-19H2,1-2H3,(H3,33,34)(H,35,39)(H,36,40)/t20-,24-,25-,26-,27+,28+/m0/s1
Stored Murcko scaffold: c1ccc(cc1)CN[CH]C2N([CH]CN[CH]CCc3ccccc3)C4CCCCC4C2

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

1973#20444
3108#21526
3109#21527
3680#22070
3696#22083

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors: 9; CDK 2.12 · 2026-08-19
Hydrogen bond donors: 5; CDK 2.12 · 2026-08-19
Rotatable bonds: 14; CDK 2.12 · 2026-08-19
Topological polar surface area: 148.61 Å²; CDK 2.12 · 2026-08-19
Molecular weight: 561.716 g/mol; CDK 2.12 · 2026-08-19
XLogP: 4.153; CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

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Source datasets

Dataset registrations and identifiers stored in MolClass.

Thrombin Molecule Binding
Dataset #14 · 3084