Molecule card · MolClass #21182

2754

2754: molecular structure, identifiers, source datasets and 0 saved model results in MolClass.

1 source records · 0 model builds with saved results

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Structure and identifiers

MolClass ID: 21182
InChIKey: LXPHZHBUHUZDRJ-SKCDSABHSA-N
Canonical SMILES: C=CCN1CCC(C1)Oc2ccc(cc2)C(Oc3ccc4CCN(Cc4(c3))C(=N)N)C(=O)OCC
Standard InChI: InChI=1S/C27H34N4O4/c1-3-13-30-14-12-24(18-30)34-22-8-6-20(7-9-22)25(26(32)33-4-2)35-23-10-5-19-11-15-31(27(28)29)17-21(19)16-23/h3,5-10,16,24-25H,1,4,11-15,17-18H2,2H3,(H3,28,29)/t24-,25?/m0/s1
Stored Murcko scaffold: O(c1ccc2c(c1)CNCC2)Cc3ccc(OC4CNCC4)cc3

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

1360#19849
1372#19861
1376#19865
2750#21178
3397#21799
4535#22877

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors: 6; CDK 2.12 · 2026-08-19
Hydrogen bond donors: 2; CDK 2.12 · 2026-08-19
Rotatable bonds: 11; CDK 2.12 · 2026-08-19
Topological polar surface area: 101.11 Å²; CDK 2.12 · 2026-08-19
Molecular weight: 478.584 g/mol; CDK 2.12 · 2026-08-19
XLogP: 4.24; CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

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Source datasets

Dataset registrations and identifiers stored in MolClass.

Thrombin Molecule Binding
Dataset #14 · 2754