Molecule card · MolClass #20427

1956

1956: molecular structure, identifiers, source datasets and 0 saved model results in MolClass.

1 source records · 0 model builds with saved results

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Structure and identifiers

MolClass ID: 20427
InChIKey: YALQNWIYMBHEMW-AREMUKBSSA-N
Canonical SMILES: CCOC(=O)c2nn(c1ccc(cc1)OC)c3C(=O)N(CCc23)c4ccc(cc4)c6ccccc6(CN5CCC(O)C5)
Standard InChI: InChI=1S/C33H34N4O5/c1-3-42-33(40)30-29-17-19-36(32(39)31(29)37(34-30)25-12-14-27(41-2)15-13-25)24-10-8-22(9-11-24)28-7-5-4-6-23(28)20-35-18-16-26(38)21-35/h4-15,26,38H,3,16-21H2,1-2H3/t26-/m1/s1
Stored Murcko scaffold: n1cc2c([CH]N(c3ccc(cc3)-c4ccccc4CN5CCCC5)CC2)n1-c6ccccc6

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

1905#20376
1935#20406
1943#20414
1946#20417
1948#20419
1950#20421
1951#20422
3090#21508
3096#21514
3137#21555
4289#22641
4924#23246

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors: 7; CDK 2.12 · 2026-08-19
Hydrogen bond donors: 1; CDK 2.12 · 2026-08-19
Rotatable bonds: 9; CDK 2.12 · 2026-08-19
Topological polar surface area: 97.13 Å²; CDK 2.12 · 2026-08-19
Molecular weight: 566.648 g/mol; CDK 2.12 · 2026-08-19
XLogP: 4.722; CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

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Source datasets

Dataset registrations and identifiers stored in MolClass.

Thrombin Molecule Binding
Dataset #14 · 1956