Structure of molecule 1199

Molecule card · MolClass #1199

LOPAC 00975

LOPAC 00975: molecular structure, identifiers, source datasets and 13 saved model results in MolClass.

2 source records · 13 model builds with saved results

Explore classification models

Structure and identifiers

Imported compound names
IdarubicinCompound induced Neuronal Stem Cell Differentiation · compound_name
MolClass ID
1199
InChIKey
XDXDZDZNSLXDNA-UHFFFAOYSA-N
Canonical SMILES
[H]C2(CC(O)(Cc1c(O)c3C(=O)c4ccccc4(C(=O)c3(c(O)c12)))C(C)=O)(OC5CC(N)C(O)C(C)O5)
Standard InChI
InChI=1S/C26H27NO9/c1-10-21(29)15(27)7-17(35-10)36-16-9-26(34,11(2)28)8-14-18(16)25(33)20-19(24(14)32)22(30)12-5-3-4-6-13(12)23(20)31/h3-6,10,15-17,21,29,32-34H,7-9,27H2,1-2H3
Stored Murcko scaffold
O1CCCCC1OC2c3cc4cc5ccccc5cc4cc3CCC2

Registry normalization: MIGRATED_RAW. A registry entry does not establish drug approval or clinical use.

Molecules with the same Murcko scaffold

Exact matches to the stored ring-and-linker framework. Sharing a scaffold does not by itself establish activity or applicability to a model.

View all molecules with this scaffold →

Calculated molecular properties

Stored descriptor calculations, not measured experimental values.

Hydrogen bond acceptors
10
CDK 2.12 · 2026-08-19
Hydrogen bond donors
5
CDK 2.12 · 2026-08-19
Rotatable bonds
3
CDK 2.12 · 2026-08-19
Topological polar surface area
176.61 Ų
CDK 2.12 · 2026-08-19
Molecular weight
497.495 g/mol
CDK 2.12 · 2026-08-19
XLogP
0.649
CDK 2.12 · 2026-08-19

Saved model predictions

Computational predictions, not experimental measurements or clinical guidance. Results depend on the model build; applicability indicates similarity to its training chemistry.

Mitochondrial Fusion

Ensemble · model #19 · build #137

inactive

Model confidence
92.7%
Applicability domain
In domain
Scaffold similarity
67.7%

Recorded

Anti-fungal drug pump selectivity

Ensemble · model #18 · build #29

inactive

Model confidence
97.1%
Applicability domain
In domain
Scaffold similarity
72.4%

Recorded

Toxcicity

Ensemble · model #17 · build #28

toxicity reported

Model confidence
61.3%
Applicability domain
In domain
Scaffold similarity
55.0%

Recorded

Molecule Aggregation

Ensemble · model #16 · build #27

Aggregator

Model confidence
75.8%
Applicability domain
Outside domain
Scaffold similarity
32.2%

Recorded

Metabolite Likeness

Ensemble · model #15 · build #26

HMDB

Model confidence
82.8%
Applicability domain
In domain
Scaffold similarity
53.9%

Recorded

Molecule Autofluorescence

LibSVM · model #13 · build #152

Autofluorescence

Model confidence
100.0%
Applicability domain
In domain
Scaffold similarity
55.7%

Recorded

Cell Cycle Activation/Inhibition

NaiveBayes · model #10 · build #21

cellcycle-

Model confidence
100.0%
Applicability domain
In domain
Scaffold similarity
56.0%

Recorded

Blood Brain Barrier

RandomForest · model #7 · build #151

BBB-

Model confidence
95.0%
Applicability domain
In domain
Scaffold similarity
55.3%

Recorded

Derivation and validation of toxicophores for mutagenicity prediction

RandomForest · model #6 · build #15

mutagen

Model confidence
97.0%
Applicability domain
In domain
Scaffold similarity
77.0%

Recorded

Benchmark data set for in silico prediction of Ames mutagenicity

Ensemble2 · model #5 · build #134

Toxic

Model confidence
88.9%
Applicability domain
In domain
Scaffold similarity
82.6%

Recorded

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

NaiveBayes · model #4 · build #14

none

Model confidence
100.0%
Applicability domain
Outside domain
Scaffold similarity
44.5%

Recorded

ADME evaluation in drug discovery: Correlation of Caco-2 permeation with simple molecular properties

Ensemble · model #2 · build #244

app+

Model confidence
82.0%
Applicability domain
Outside domain
Scaffold similarity
36.2%

Recorded

Chemical genetics reveals a complex functional ground state of neural stem cells

Ensemble · model #1 · build #16

Proliferation

Model confidence
67.0%
Applicability domain
In domain
Scaffold similarity
58.3%

Recorded

Source datasets

Dataset registrations and identifiers stored in MolClass.

  • Compound induced Neuronal Stem Cell Differentiation

    Dataset #1 · 1244

  • Toxicity Benchmark

    Dataset #5 · 58957-92-9